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yobK [2018-11-07 15:40:46]
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yobK [2018-11-07 15:40:46]

antitoxin
locus
BSU18990
pI
3.97
mw
17.57 kDa
protein length
152 aa Sequence Blast
gene length
456 bp Sequence Blast
function
inhibition of the cytotoxic activity of YobL
product
antitoxin
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.17|Toxins, antitoxins and immunity against toxins] → [category|SW 4.3.17.2|Type 2 TA systems]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.18|Toxins, antitoxins and immunity against toxins/ based on similarity]

    • Gene

    Coordinates
    2,071,286 → 2,071,744

    The protein

    Structure

  • [PDB|2PRV]

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Biological materials

    Mutant

  • MGNA-A308 (yobK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/308 NBRP B. subtilis, Japan]
  • BKE18990 (Δ[gene|E9FE0BA3CB7ABF98762F65B619ADC6BE0EC54B4E|yobK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTCGAATAAATCATATAAA, downstream forward: _UP4_TAAGCAAAAGTATTGCTATA
  • BKK18990 (Δ[gene|E9FE0BA3CB7ABF98762F65B619ADC6BE0EC54B4E|yobK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTCGAATAAATCATATAAA, downstream forward: _UP4_TAAGCAAAAGTATTGCTATA

    • References

  • 22200572